Saving Haeckel: Why “ontogeny recapitulates phylogeny” isn’t so wrong

Ernst Haeckel published his influential theory of embryology, distilled as “ontogeny recapitulates phylogeny” in 1866, seven years after Darwin’s On the Origin of Species. Haeckel’s theory fell out of favor and hasn’t been part of evolutionary theory for decades, but it’s still cited today as a cause of mischief by modern Creationists.

Haeckel’s theory

The similarities between embryos of different animal species were noted decades before Darwin: while adults of different species are easy to tell apart, their embryos are not. Haeckel took this further and is most known for his 1874 drawing (above) of the development of various animal embryos—fish, chicken, human, and so on—to illustrate his point.

Ontogeny is the development of an embryo, and phylogeny is an organism’s evolutionary history. So by “ontogeny recapitulates phylogeny,” Haeckel was saying that you can watch through an organism’s development as an embryo a replay of its development through hundreds of million years of evolution. For example, a human embryo first looks like a fish (notice the gill-like structure), then like a reptile (four limbs and a tail), and finally like a mammal, which is the evolutionary path that humans took.

But it doesn’t work like that.

What embryology actually tells us

Let’s put Haeckel aside for now and look for clues to evolution within embryology. If Creationists could get beyond “Haeckel was wrong,” which no one denies, there are important insights here. What’s fascinating is how embryonic structures that developed in animals that preceded humans, like fish and reptiles, have been repurposed by evolution for humans.

Pharyngeal arches or folds (often improperly called “gill slits”) are the double-chin-like folds under the head in the early embryo stage. This striking feature is found in all vertebrate embryos.

The arches that develop into gills in fish become various cartilages, glands, muscles, and other tissue in the human neck and face.

These arches explain the strange path of the recurrent laryngeal nerve. Pharyngeal arches four, five, and six (arch one is closest to the head) fuse early in the development of mammal embryos. The recurrent laryngeal nerve comes from the fourth arch, and after the fusion, it is near an artery from the sixth arch. This creates a straightforward layout in fish, but in mammals the neck takes the brain and larynx (connected by this nerve) away from the heart. The problem is that the nerve is hooked around that artery. That means that in all mammals—yes, even the long-necked giraffe—the nerve goes from the brain, down around this artery, and back up to the larynx. No perfect designer would create this, but it is nicely explained by evolution.

Another example of repurposing (technically, exaptation) is the mammalian ear. Structures that develop into a multi-bone jaw in reptiles have been repurposed to become ear bones in mammals. In fact, it was embryology, not fossils, that provided the first clues of this evolution.

Turn back humans’ evolutionary clock and we see the tail grow back (as in other mammals), the ear bones become jaws (as in reptiles), and the throat becomes gills (as in fish).

The Creationists

Creationists respond that the perfect designer was making variations on a theme. If you’ve got a great design, why design everything from scratch? Why not simply tweak it for various environments? This designer is like a car company that makes small cars (shrew, mouse) and big ones (elephant, whale), cars that are beautiful (peacock, gazelle), and cars for tough environments (camel, yak), and so on.

The supernatural assumption adds nothing when we have a natural theory that explains evolution just fine. “God” is a solution looking for a problem, and we don’t have a problem here.

Another obvious similarity across early embryos is the tail. Human embryonic tails are absorbed later in development. The hind limbs of cetaceans like whales also appear in embryos and are likewise absorbed.

If you saw the movie Avatar, did you catch the evolution mistake it makes? The land animals had six limbs and breathed through a second mouth on their shoulders. The winged creatures also had six limbs—four legs and two wings. But the Na’vi people had four limbs and no shoulder mouths. If they had a common ancestor with the other animals of their world, like people on earth, you would see these fundamental characteristics shared.

Ah, well—Hollywood.

Creationism’s failure

Why do adult animals differ in appearance but look similar to embryos? Why should the same basic embryonic components become gills in fish but faces in mammals? Why do human embryos have a tail that is later reabsorbed? The common beginning as early embryos and later divergence to satisfy different body plans points to common ancestry, not design. Evolution explains all this nicely, while Creationism has no explanation.

The Creationist playbook is to attack evolution, usually by asking questions that are important but already answered. Biologists have a ready answer, but these questions stump the average person, and deceiving a lay audience is the goal, not changing biologists’ minds.

Even if Creationism’s questions were new and insightful (they never are), Creationism doesn’t become the dominant scientific paradigm by showing flaws in evolution; it could only do that by explaining the evidence better. But since Creationists are only pretending to be scientific, playing by science’s rules is never the goal. Creationists don’t participate in the domain of regular biology, which includes conferences, journals, and laboratories. They’ve already lost there, and that’s been true for a century. So they peddle their message exclusively to the public, a glaring admission that they aren’t doing science.

Yes, Haeckel was wrong, and his error, like any popular wrong turn, delayed progress. But evolution was never built with this as part of its foundation. Turn back humans’ evolutionary clock and we see the tail grow back (as in other mammals), the ear bones become jaws (as in reptiles), and the throat becomes gills (as in fish). Haeckel got a lot wrong, but he was right that embryology holds clues to where we came from.

Somebody’s gotta stand up to experts.
Don McLeroy,
on the Texas board of education but not a biologist,
speaking against evolution in public schools

Organic material found in T-Rex fossils: Evidence of young earth?

Paleontologists try to recover dinosaur fossils intact. The last thing they’d want to do is break a precious fossil bone. It’s just mineralized bone—what of interest could possibly be inside? Anyway, cells and proteins quickly degrade in time periods used to measure fossils.

Or do they? Paleontologist Mary Schweitzer published evidence in 1993 of biological molecules like collagen, a common protein in animals, found in Tyrannosaurus rex fossils. In 2005, she published more evidence, this time of soft-tissue preservation. (Note that many fossil bones are completely mineralized. Collagen can only be found in under mineralized fossils—that is, fossils that are incompletely fossilized).

Creationist Christmas

Creationists jumped on this discovery. They don’t actually do science, of course, but they love to sift out the bits that can be spun to support their conclusion. Let’s look at their reaction to this discovery as we explore the science.

Shortly after the 2005 research, Ken Ham’s Answers in Genesis said,

The creationists now possess immensely powerful evidence against the well-publicized belief that dinosaurs lived millions of years ago and instead have tremendous support for the biblical timeline of a recent creation.

More recently, Creation Ministries International said:

These facts [about soft tissue in fossils] have been a thorn in [scientists’] side for several years now as they are incredibly difficult to explain within an evolutionary (millions of years) timeframe. Needless to say, they fit beautifully within a biblical (young earth) timescale; these are almost certainly the remains of creatures that were buried during the Genesis Flood, approximately 4,400 years ago.

This isn’t a thorn; it’s a new discovery. New discoveries are a good thing, but science must make really, really sure that new ideas are solid before they are accepted.

And scientists did push back. One proposed explanation was that Schweitzer was seeing modern bacterial contamination rather than ancient dinosaur protein, but that has been rejected.

Answers in Genesis observed about Schweitzer: “Her first reaction was to question the evidence, not the paradigm,” as if she had been at fault for not immediately leaping to their young-earth conclusion. But questioning is what good scientists do. There might be many ways the result of an experiment could be misunderstood, so of course, she questioned the conclusions. The result was a more solid conclusion.

New discoveries are a good thing, but science must make really, really sure that new ideas are solid before they are accepted.

Gloating

There was the obligatory cackling in delight. I suppose that’s expected since reality so often craps on Creationists.

Evolutionists like [Schweitzer] have been scrambling . . . to explain away this powerful evidence that dinosaurs have been around in relatively recent times.

Long-agers went into intense, but not very effective damage control.

The information that there are abundant amounts of soft tissue in creatures supposedly millions of years old is spiralling [sic] out of control. Evolutionists know that they need to confront this dinosaur soft tissue matter head on, and their responses to date have been far from convincing.

This is what someone looks like who’s determined to misunderstand the process of science.

What explains the soft tissue?

If paleontologists think that dinosaur fossils are tens of millions of years and organic material degrades in less time than that, the soft-tissue discovery means either that the fossils aren’t that old or (gasp!) the estimated rate of decay for organic molecules in fossils is wrong. Shocking though it seems, there’s a rather obvious alternative possibility than that the Creationists have been right all along.

The current conclusion is that iron is the key to the soft-tissue puzzle. After death, iron in the dinosaur blood is freed from the blood cells and forms free radicals, which then act like formaldehyde to cross-link the proteins. This cross-linking makes the protein stronger and resistant to decay.

One Creationist source sniffed that this iron explanation was an act of “desperation.”

It’s all about the PR

Creationists fight their battles with words, since they don’t have the science on their side. Sometimes they imagine that their opponents play the same game.

Such is the power of the evolutionary paradigm that many choose to believe the seemingly impossible rather than accept the obvious implication, that the samples are not as old as they say.

Ah, so it’s just a seductive worldview that blinds scientists to the obvious truth. And wouldn’t “We didn’t fully understand how protein degrades” be an even more obvious implication?

About the iron hypothesis:

It’s actually very strategic. By announcing this as ‘the answer’, evolutionists may catch creationists off-balance, lessening the impact of the argument. From now on [the average Joe] will likely not be surprised if he is presented with the facts of dinosaur soft tissue found in fossils, thinking evolutionary scientists have already explained this. The creationists are crazy to think dinosaurs died out recently!

Since Creationists start with their conclusion and select facts to support it rather than starting with the facts and following them to an honest conclusion, they imagine the same deviousness in their enemies. Here they lay out the playbook:

A world that made itself is basic to this religion [of secularism], and it absolutely, definitely needs millions of years. So instead, in the face of this evidence, the desperate search has continued—for some mechanism, even part-way plausible-seeming, to give this belief system some straws to clutch at.

Apparently, biologists and paleontologists are in the same sad, evidence-denying boat as they are. It’s the world’s biggest conspiracy—tens of thousands of scientists know the truth but have pinkie-sworn to cover it up.

Hemant Mehta summarized this issue a couple of years ago. He came across an article from Ken Ham’s Creation Museum. They had been given some dinosaur bones, and David Menton (Ph.D. in cell biology; now a speaker and researcher for Answers in Genesis) planned on looking for organic material inside. The article concluded:

If Dr. Menton finds what he is looking for, you can count on a big write-up for Answers in Genesis in the near future!

In other words, we’ll report on the findings if and only if they support our conclusion. True to the mission of the museum—“Why God’s infallible Word, rather than man’s faulty assumptions, is the place to begin if we want to make sense of our world”—they have no use for evidence.

Unless they can find a bit that supports their view, in which case they’re all over it.

It’s the film version
of winning arguments in your head in the shower.
— comment in response to
the “God’s Not Dead” trailer